60 wildflowers were recorded blooming in New York in September in our iNaturalist sample; 17 of the top 50 are at their peak this month. The list is ranked by number of research-grade observations.
Top wildflowers in September

White Snakeroot

Common Jewelweed

New England aster

Asiatic dayflower

White Turtlehead
Bluestem Goldenrod
Chicory

White Wood Aster

brown-eyed Susan
Purple Loosestrife

Flat-Topped Goldenrod

black-eyed Susan
All wildflowers blooming in New York in September
| # | Species | Scientific name | Family | Obs. | Peak in state |
|---|---|---|---|---|---|
| 1 | White Snakeroot | Ageratina altissima | Sunflowers, Daisies, Asters, and Allies | 734 | Oct (rising) |
| 2 | Common Jewelweed | Impatiens capensis | balsam family | 547 | Aug (past peak) |
| 3 | New England aster | Symphyotrichum novae-angliae | Sunflowers, Daisies, Asters, and Allies | 432 | Sep (peak) |
| 4 | Asiatic dayflower | Commelina communis | Spiderworts | 213 | Sep (peak) |
| 5 | White Turtlehead | Chelone glabra | Plantain Family | 212 | Sep (peak) |
| 6 | Bluestem Goldenrod | Solidago caesia | Sunflowers, Daisies, Asters, and Allies | 202 | Sep (peak) |
| 7 | Chicory | Cichorium intybus | Sunflowers, Daisies, Asters, and Allies | 188 | Jul (past peak) |
| 8 | White Wood Aster | Eurybia divaricata | Sunflowers, Daisies, Asters, and Allies | 188 | Sep (peak) |
| 9 | brown-eyed Susan | Rudbeckia triloba | Sunflowers, Daisies, Asters, and Allies | 179 | Aug (past peak) |
| 10 | Purple Loosestrife | Lythrum salicaria | lythrum family | 170 | Aug (past peak) |
| 11 | Flat-Topped Goldenrod | Euthamia graminifolia | Sunflowers, Daisies, Asters, and Allies | 169 | Aug (past peak) |
| 12 | black-eyed Susan | Rudbeckia hirta | Sunflowers, Daisies, Asters, and Allies | 156 | Jul (past peak) |
| 13 | Bird's-Foot Trefoil | Lotus corniculatus | Legumes | 137 | Jun (past peak) |
| 14 | Great Blue Lobelia | Lobelia siphilitica | bellflower family | 134 | Aug (past peak) |
| 15 | American hog-peanut | Amphicarpaea bracteata | Legumes | 129 | Aug (past peak) |
| 16 | American pokeweed | Phytolacca americana | Pokeweed Family | 128 | Jul (past peak) |
| 17 | Silverrod | Solidago bicolor | Sunflowers, Daisies, Asters, and Allies | 123 | Sep (peak) |
| 18 | Red Clover | Trifolium pratense | Legumes | 121 | Jun (past peak) |
| 19 | Common Toadflax | Linaria vulgaris | Plantain Family | 120 | Aug (past peak) |
| 20 | Broad-Leaved Goldenrod | Solidago flexicaulis | Sunflowers, Daisies, Asters, and Allies | 118 | Sep (peak) |
| 21 | Tall Goldenrod | Solidago altissima | Sunflowers, Daisies, Asters, and Allies | 117 | Sep (peak) |
| 22 | Jimsonweed | Datura stramonium | nightshade family | 116 | Aug (past peak) |
| 23 | Calico Aster | Symphyotrichum lateriflorum | Sunflowers, Daisies, Asters, and Allies | 116 | Sep (peak) |
| 24 | Wild Carrot | Daucus carota | carrot family | 114 | Jul (past peak) |
| 25 | Autumn Clematis | Clematis terniflora | buttercup family | 109 | Sep (peak) |
| 26 | Common Wrinkle-Leaved Goldenrod | Solidago rugosa | Sunflowers, Daisies, Asters, and Allies | 108 | Sep (peak) |
| 27 | Pale Jewelweed | Impatiens pallida | balsam family | 103 | Aug (past peak) |
| 28 | Japanese knotweed | Reynoutria japonica | knotweed family | 93 | Sep (peak) |
| 29 | Upright Yellow Woodsorrel | Oxalis stricta | Woodsorrel Family | 89 | Aug (past peak) |
| 30 | Herb Robert | Geranium robertianum | Geranium family | 84 | Jun (past peak) |
| 31 | Low Smartweed | Persicaria longiseta | knotweed family | 76 | Oct (rising) |
| 32 | Common Boneset | Eupatorium perfoliatum | Sunflowers, Daisies, Asters, and Allies | 74 | Aug (past peak) |
| 33 | Northern Seaside Goldenrod | Solidago sempervirens | Sunflowers, Daisies, Asters, and Allies | 73 | Oct (rising) |
| 34 | Common Selfheal | Prunella vulgaris | Mint Family | 72 | Jul (past peak) |
| 35 | Common Hibiscus | Hibiscus syriacus | Mallow and Hibiscus Family | 71 | Aug (past peak) |
| 36 | Pearly Everlasting | Anaphalis margaritacea | Sunflowers, Daisies, Asters, and Allies | 68 | Aug (past peak) |
| 37 | Pinesap | Monotropa hypopitys | heath family | 66 | Sep (peak) |
| 38 | Broadleaf Arrowhead | Sagittaria latifolia | Water-Plantain family | 63 | Aug (past peak) |
| 39 | White Clover | Trifolium repens | Legumes | 63 | Jun (past peak) |
| 40 | Frost Aster | Symphyotrichum pilosum | Sunflowers, Daisies, Asters, and Allies | 60 | Oct (rising) |
| 41 | Whorled Wood Aster | Oclemena acuminata | Sunflowers, Daisies, Asters, and Allies | 58 | Sep (peak) |
| 42 | American burnweed | Erechtites hieraciifolius | Sunflowers, Daisies, Asters, and Allies | 56 | Sep (peak) |
| 43 | Cardinal Flower | Lobelia cardinalis | bellflower family | 54 | Aug (past peak) |
| 44 | Moth Mullein | Verbascum blattaria | figwort family | 54 | Jun (past peak) |
| 45 | Wingstem | Verbesina alternifolia | Sunflowers, Daisies, Asters, and Allies | 54 | Sep (peak) |
| 46 | fen grass of Parnassus | Parnassia glauca | staff-vine family | 50 | Aug (past peak) |
| 47 | Late Boneset | Eupatorium serotinum | Sunflowers, Daisies, Asters, and Allies | 47 | Sep (peak) |
| 48 | Hedge Bindweed | Calystegia sepium | bindweed family | 47 | Jul (past peak) |
| 49 | Horseweed | Erigeron canadensis | Sunflowers, Daisies, Asters, and Allies | 47 | Aug (past peak) |
| 50 | Groundsel Tree | Baccharis halimifolia | Sunflowers, Daisies, Asters, and Allies | 45 | Oct (rising) |